Biomolecular Simulations

Recordings of lectures in the MSc course Biomolecular Simulations
-Structure
-Force fields
-Molecular Dynamics
-Enhanced sampling

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Recordings of lectures in the MSc course Biomolecular Simulations
-Structure
-Force fields
-Molecular Dynamics
-Enhanced sampling

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Biased sampling - live 1 of 15

duration 1 hour 32 minutes

Biased sampling - live

From Jocelyne Vreede April 22nd, 2021

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Part 0: Recap free energyPart 1: Steered Molecular DynamicsPart 2: Biased sampling-umbrella sampling-metadynamicsPart 3: The reaction coordinate problem-path-metadynamics
Biased sampling - part 1 2 of 15

duration 32 minutes 58 seconds

Biased sampling - part 1

From Jocelyne Vreede April 19th, 2021

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Part 0: Recap free energyPart 1: Steered Molecular DynamicsPart 2: Biased sampling-umbrella sampling-metadynamicsPart 3: The reaction coordinate problem
Biased sampling - part 2 3 of 15

duration 19 minutes 46 seconds

Biased sampling - part 2

From Jocelyne Vreede April 19th, 2021

0 likes 19 plays 0
Part 0: Recap free energyPart 1: Steered Molecular DynamicsPart 2: Biased sampling-umbrella sampling-metadynamicsPart 3: The reaction coordinate problem
Biased sampling - part 3 4 of 15

duration 29 minutes 52 seconds

Biased sampling - part 3

From Jocelyne Vreede April 19th, 2021

0 likes 25 plays 0
Part 0: Recap free energyPart 1: Steered Molecular DynamicsPart 2: Biased sampling-umbrella sampling-metadynamicsPart 3: The reaction coordinate problem
Biased sampling - part 4 5 of 15

duration 24 minutes 44 seconds

Biased sampling - part 4

From Jocelyne Vreede April 19th, 2021

0 likes 22 plays 0
Part 0: Recap free energyPart 1: Steered Molecular DynamicsPart 2: Biased sampling-umbrella sampling-metadynamicsPart 3: The reaction coordinate problem
Force fields - part 1 6 of 15

duration 48 minutes 28 seconds

Force fields - part 1

From Jocelyne Vreede April 11th, 2022

0 likes 19 plays 0
Lecture in Biomolecular Simulations Force fields Daan Geerke
Force fields - part 2a 7 of 15

duration 28 minutes 7 seconds

Force fields - part 2a

From Jocelyne Vreede April 11th, 2022

0 likes 6 plays 0
Lecture in Biomolecular Simulations Force fields Daan Geerke
Force fields - part 2b 8 of 15

duration 58 minutes 6 seconds

Force fields - part 2b

From Jocelyne Vreede April 11th, 2022

0 likes 8 plays 0
Lecture in Biomolecular Simulations Force fields Daan Geerke
gromacs-tutorial 9 of 15

duration 30 minutes 49 seconds

gromacs-tutorial

From Jocelyne Vreede April 19th, 2021

0 likes 13 plays 0
Demonstration of the gromacs tutorial
Lecture 1 - structure - part1 10 of 15

duration 34 minutes 22 seconds

Lecture 1 - structure - part1

From Jocelyne Vreede March 22nd, 2021

0 likes 73 plays 0
Lecture on structure and structure determination of biomolecules
Lecture 1 - structure - part2 11 of 15

duration 37 minutes 32 seconds

Lecture 1 - structure - part2

From Jocelyne Vreede March 22nd, 2021

0 likes 56 plays 0
Lecture on structure and structure determination of biomolecules
Lecture 1 - structure - part3 12 of 15

duration 25 minutes 21 seconds

Lecture 1 - structure - part3

From Jocelyne Vreede March 22nd, 2021

0 likes 35 plays 0
Lecture on structure and structure determination of biomolecules
Lecture 1 - structure - part4 13 of 15

duration 8 minutes 9 seconds

Lecture 1 - structure - part4

From Jocelyne Vreede March 22nd, 2021

0 likes 23 plays 0
Lecture on structure and structure determination of biomolecules
Lecture 2 - Molecular Dynamics - part1 14 of 15

duration 16 minutes 42 seconds

Lecture 2 - Molecular Dynamics - part1

From Jocelyne Vreede April 2nd, 2021

0 likes 53 plays 0
Biomolecular Simulations Lecture on Molecular Dynamics
Lecture 2 - Molecular Dynamics - part2 15 of 15

duration 16 minutes 28 seconds

Lecture 2 - Molecular Dynamics - part2

From Jocelyne Vreede April 2nd, 2021

0 likes 47 plays 0
Biomolecular Simulations Lecture on Molecular Dynamics

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